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The Dichotomy in Degree Correlation of Biological Networks

机译:生物网络的度相关二分法

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摘要

Most complex networks from different areas such as biology, sociology or technology, show a correlation on node degree where the possibility of a link between two nodes depends on their connectivity. It is widely believed that complex networks are either disassortative (links between hubs are systematically suppressed) or assortative (links between hubs are enhanced). In this paper, we analyze a variety of biological networks and find that they generally show a dichotomous degree correlation. We find that many properties of biological networks can be explained by this dichotomy in degree correlation, including the neighborhood connectivity, the sickle-shaped clustering coefficient distribution and the modularity structure. This dichotomy distinguishes biological networks from real disassortative networks or assortative networks such as the Internet and social networks. We suggest that the modular structure of networks accounts for the dichotomy in degree correlation and vice versa, shedding light on the source of modularity in biological networks. We further show that a robust and well connected network necessitates the dichotomy of degree correlation, suggestive of an evolutionary motivation for its existence. Finally, we suggest that a dichotomous degree correlation favors a centrally connected modular network, by which the integrity of network and specificity of modules might be reconciled.
机译:来自不同领域(例如生物学,社会学或技术领域)的大多数复杂网络都显示出节点程度的相关性,其中两个节点之间建立链接的可能性取决于它们的连通性。人们普遍认为,复杂的网络要么是分散的(集线器之间的链接被系统地抑制),要么是分散的(集线器之间的链接被增强)。在本文中,我们分析了各种生物网络,发现它们通常显示出二分相关。我们发现,生物网络的许多特性可以通过这种程度相关的二分法来解释,包括邻域连通性,镰刀形聚类系数分布和模块化结构。这种二分法将生物网络与真正的分散网络或诸如互联网和社交网络之类的分散网络区分开来。我们建议网络的模块化结构解释了度相关性的二分法,反之亦然,这说明了生物网络中模块化的来源。我们进一步表明,一个健壮且连接良好的网络需要度相关性的二分法,暗示其存在的进化动机。最后,我们建议二分度相关性有利于中央连接的模块化网络,通过该网络可以协调网络的完整性和模块的特异性。

著录项

  • 作者

    Hao, Dapeng; Li, Chuanxing;

  • 作者单位
  • 年度 2011
  • 总页数
  • 原文格式 PDF
  • 正文语种 {"code":"en","name":"English","id":9}
  • 中图分类

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